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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SingleMoleculeGenomicsIO" in publications use:'
type: software
license: MIT
title: 'SingleMoleculeGenomicsIO: Tools for reading single molecule genomics data'
version: 0.1.9
abstract: Provides tools for reading of single-molecule genomics data from different
  file formats in R. The package includes functions for reading collapsed or read-level
  data from modBAM, bedMethyl and `modkit extract` tabular files, as well as C-to-T
  conversion based BAM files, as `SummarizedExperiment` objects.
authors:
- family-names: Stadler
  given-names: Michael
  email: michael.stadler@fmi.ch
  orcid: https://orcid.org/0000-0002-2269-4934
- family-names: Soneson
  given-names: Charlotte
  email: charlotte.soneson@fmi.ch
  orcid: https://orcid.org/0000-0003-3833-2169
- family-names: Papasaikas
  given-names: Panagiotis
  email: panagiotis.papasaikas@fmi.ch
  orcid: https://orcid.org/0000-0002-1640-7636
- family-names: Smallwood
  given-names: Sebastien
  email: sebastien.smallwood@fmi.ch
  orcid: https://orcid.org/0009-0006-8466-2459
repository: https://fmicompbio.r-universe.dev
repository-code: https://github.com/fmicompbio/SingleMoleculeGenomicsIO
commit: 8c2db76b5182cc8223fff51c362662f1778f5cb5
url: https://fmicompbio.github.io/SingleMoleculeGenomicsIO
date-released: '2026-10-19'
contact:
- family-names: Stadler
  given-names: Michael
  email: michael.stadler@fmi.ch
  orcid: https://orcid.org/0000-0002-2269-4934